Tool Packages

BioImageFlow tool package documentation is included from package-owned docs/ directories. Each package owns its tools, workflows, tests, examples, and detailed user documentation.

Custom package docs can be added to a local documentation build by setting BIOIMAGEFLOW_DOC_PACKAGE_PATHS to one or more package directories that declare [tool.bioimageflow.docs] metadata.

First-Party Packages

• bioimageflow-common-tools

• bioimageflow-io-tools

• bioimageflow-segmentation-tools

• bioimageflow-measurement-tools

• bioimageflow-spot-tools

• bioimageflow-tracking-tools

• bioimageflow-restoration-tools

• BioImageFlow SAIRPICO Tools